Information for 6-NNNNNVARVRVNNNNN (Motif 19)

T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
Reverse Opposite:
A T C G A T C G A T C G A G T C A G C T A G C T A G C T A G C T A G C T A G C T A G C T A C G T A C G T A G C T A G C T A G C T
p-value:1e-3
log p-value:-8.133e+00
Information Content per bp:1.319
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.17%
Number of Background Sequences with motif1794.5
Percentage of Background Sequences with motif3.69%
Average Position of motif in Targets46.5 +/- 23.8bp
Average Position of motif in Background49.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-NNNNNVARVRVNNNNN
TACTGGAAAAAAAA---
 A C G T T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:NNNNNVARVRVNNNNN-
GTTAAAAAAAAAAATTA
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:NNNNNVARVRVNNNNN
---AAAACAAAGG---
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-NNNNNVARVRVNNNNN
AGCCGAAAAAAAAAT--
 A C G T T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:NNNNNVARVRVNNNNN-
AGAAGAACAAAGGACTA
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--NNNNNVARVRVNNNNN
CAAAAGTAAACAAAG---
 A C G T A C G T T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:NNNNNVARVRVNNNNN
-----NANANAC----
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
A C G T A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:NNNNNVARVRVNNNNN--
-ATAAGAACAAAGGACTA
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-NNNNNVARVRVNNNNN
AACAAACAACAAGAG--
 A C G T T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:NNNNNVARVRVNNNNN
---GGAACAAAGR---
 T C G A T C G A T C G A T G A C T G C A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T A C G T A G C T A G C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T