Information for 2-TACTAATGTAATW (Motif 6)

A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
G C A T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A G C T T C G A A C T G A G C T C T G A
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 34.8bp
Average Position of motif in Background46.0 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TACTAATGTAATW-
---TAATTTAATTA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TACTAATGTAATW-
---TAATTTAATTA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TACTAATGTAATW-
---TAATTTAATTA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TACTAATGTAATW-
--YTAATYNRATTA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TACTAATGTAATW-
--NTAATBNAATTA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TACTAATGTAATW--
--CTAATTTAATCAA
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TACTAATGTAATW
--ATGATGCAAT-
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TACTAATGTAATW-
---TTATGTAACAT
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

PH0103.1_Meox1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TACTAATGTAATW-----
--CTGAGGTAATTACCNC
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TACTAATGTAATW
--MTGATGCAAT-
 A G C T C T G A A G T C A C G T C T G A C G T A A C G T A C T G A C G T C G T A C G T A A C G T C G T A
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T