Information for 7-ACGAATAAAC (Motif 28)

C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T C G A T C G T A A G C T A C G T G T A C A C T G A C G T
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif41.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.6 +/- 29.7bp
Average Position of motif in Background42.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACGAATAAAC----
---AATAAACAATN
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACGAATAAAC-
-CCAATAAAAA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACGAATAAAC-
-CCAATAAAAC
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACGAATAAAC----
AACCCAATAAAATTCG
 A C G T A C G T C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACGAATAAAC
CCYMATAAAA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACGAATAAAC-
-CCAATAAAAA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACGAATAAAC-
--AAATAAACA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACGAATAAAC
NCYAATAAAA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACGAATAAAC---
-SSAATCCACANN
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACGAATAAAC--
----GTAAACAA
 C G T A A G T C A C T G C G T A C T G A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A