Information for 3-GGCGGCCTGA (Motif 23)

A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
Reverse Opposite:
C G A T A G T C C T G A A C T G A T C G A G T C A G T C A T C G A G T C A G T C
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.882
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets49.4 +/- 29.9bp
Average Position of motif in Background49.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGCGGCCTGA
GGCGCGCT--
 A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGCCTGA-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCGGCCTGA---
-GTGGCGTGACNG
 A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGCGGCCTGA
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGCCTGA
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCGGCCTGA
TAATGGCGGNC---
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCGGCCTGA
--AGGCCTAG
 A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGCCTGA
NNTNAGGGGCGGNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGCCTGA
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCGGCCTGA
--AGGCCTNG
 A C T G A C T G A T G C C T A G A C T G A T G C A G T C A G C T A C T G C G T A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G