Information for 17-CGCTSAATGTTCCAGC (Motif 22)

A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
Reverse Opposite:
C T A G A T G C A C G T A C T G A T C G C T G A G T C A A G T C C T G A A C G T A C G T A T C G C G T A A C T G A G T C A T C G
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.701
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.4 +/- 27.3bp
Average Position of motif in Background46.6 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC---
---------TTCCCGCCWG
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGCTSAATGTTCCAGC
AGAGTGCTGATTGGTCCA--
 A C G T A C G T A C G T A C G T A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGCTSAATGTTCCAGC
AASCACTCAA---------
 A C G T A C G T A C G T A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC
NGCTN-----------
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CGCTSAATGTTCCAGC
-------TTTTCCA--
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CGCTSAATGTTCCAGC
AGCCACTCAAG--------
 A C G T A C G T A C G T A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC
------CTGTTCCTGG
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC-
-------NYTTCCCGCC
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC--
-------NNTTCCCGCCC
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGCTSAATGTTCCAGC-
----GAANNTTCTAGAA
 A T G C T C A G A G T C A C G T A T G C G T C A T G C A A G C T T C A G A C G T A G C T A T G C G T A C G T C A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A