Information for 2-TATTACACAGACWGGT (Motif 2)

C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
Reverse Opposite:
C G T A G T A C G T A C G C A T A C T G A C G T G A T C A C G T A C T G C G A T A C T G A C G T C G T A C G T A A G C T C G T A
p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.1 +/- 21.6bp
Average Position of motif in Background55.5 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TATTACACAGACWGGT
CCGTATTATAAACAA----
 A C G T A C G T A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TATTACACAGACWGGT
SSAATCCACANN-----
 A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TATTACACAGACWGGT
-AAACCACAGAN----
 C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TATTACACAGACWGGT
TCCAATCCACA-------
 A C G T A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TATTACACAGACWGGT
AAAAATAACAAACGG----
 A C G T A C G T A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TATTACACAGACWGGT
----ACAAAG------
 C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TATTACACAGACWGGT
ANGTTACATAA------
 A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TATTACACAGACWGGT
AGAAGAACAAAGGACTA-
 A C G T A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TATTACACAGACWGGT
------CCAGACRSVB
 C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TATTACACAGACWGGT
ATAAGAACAAAGGACTA-
 A C G T A C G T C G A T C T G A C G A T C G A T G T C A A G T C C G T A A G T C C G T A C A T G C G T A G T A C C G T A A C T G A C T G C G A T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T