Information for 13-TCCATTGACC (Motif 38)

A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
Reverse Opposite:
A C T G A T C G C G A T A G T C C G T A C G T A A C G T C T A G A C T G C G T A
p-value:1e-4
log p-value:-1.052e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.3 +/- 21.9bp
Average Position of motif in Background44.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCATTGACC
-CCATTGTTC
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCATTGACC
NCCATTGTTC
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCATTGACC-
-CCATTGTTYB
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCATTGACC----
-CNNTTGACCTTTG
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTGACC--
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCCATTGACC---
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCATTGACC
NCCATTGTTY
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCATTGACC
CTCATTGTC-
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCATTGACC
-CCWTTGTY-
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCATTGACC-------
NNANTTGACCCCTNNNN
 A C G T A G T C A G T C C G T A A C G T A C G T C T A G C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G