Information for 15-RGTAACACTCCAC (Motif 31)

C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C A T G A C T G C G T A C A T G A C G T A C T G A C G T A C G T G T C A G T A C G A T C
p-value:1e-5
log p-value:-1.367e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.2 +/- 26.6bp
Average Position of motif in Background47.8 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RGTAACACTCCAC
--NAACAAT----
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RGTAACACTCCAC---
----SSAATCCACANN
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RGTAACACTCCAC
---CACATTCCAT
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:RGTAACACTCCAC
----ACATTCCA-
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RGTAACACTCCAC
-------ATCCAC
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RGTAACACTCCAC
---NSCACTYVAV
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RGTAACACTCCAC
---RSCACTYRAG
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RGTAACACTCCAC
---CACATTCCAT
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGTAACACTCCAC
---AACAAT----
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RGTAACACTCCAC
--MRSCACTYAA-
 C T A G A C T G A C G T C G T A C G T A A G T C C G T A G A T C A C G T A G T C G A T C C G T A A G T C
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T