p-value: | 1e-6 |
log p-value: | -1.427e+01 |
Information Content per bp: | 1.779 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 2.93% |
Number of Background Sequences with motif | 67.3 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 39.9 +/- 31.0bp |
Average Position of motif in Background | 49.2 +/- 24.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTSACCTYACARG -TGACCTYA---- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTSACCTYACARG NNACTTACCTN----- |
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Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTSACCTYACARG GKVTCADRTTWC--- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTSACCTYACARG GTGACCTT----- |
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Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTSACCTYACARG GKMTCADRTTWC--- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTSACCTYACARG -TGACCYCT---- |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTSACCTYACARG -TGACCTTTNCNT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTSACCTYACARG -TGACCT------ |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTSACCTYACARG NNNGTGACCTTTGNNN |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTSACCTYACARG CTGACCTTTG--- |
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