Information for 1-GGAGABDTCACTA (Motif 2)

A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A
Reverse Opposite:
A G C T C G T A A C T G A G C T C T A G G T C A G A C T T A G C A C G T A G T C A C G T A G T C G T A C
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.2 +/- 15.5bp
Average Position of motif in Background46.3 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGAGABDTCACTA-----
AADGAGVCANYASTACAGNC
 A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGABDTCACTA
CGGAGC--------
 A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAGABDTCACTA-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGAGABDTCACTA--
-----GTTAACTAGN
 A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGAGABDTCACTA----
--AGATGCTRCTRCCHT
 A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGAGABDTCACTA---
----AGGTCTCTAACC
 A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----GGAGABDTCACTA
TTGACCGAGAATTCC---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGAGABDTCACTA------
GGYAGCAYDTGCTDCCCNNN
 A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GGAGABDTCACTA--
NNNCAGCTGTCAATATN
 A C G T A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGAGABDTCACTA
CGGTGACGTCAC--
 A C G T A C T G A C T G C G T A A C T G G T C A A C T G C G T A A C G T A G T C C T G A A G T C C G A T C T G A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T