Information for 3-TGGCATGTCT (Motif 9)

C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
Reverse Opposite:
T G C A T A C G C T G A T G A C G T C A G C A T C A T G G T A C A G T C G T C A
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.658
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.74%
Number of Background Sequences with motif1132.3
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets51.2 +/- 24.6bp
Average Position of motif in Background49.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD3/MA0808.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGCATGTCT
TGGAATGT--
 C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGCATGTCT-------
NNTNNTGTCTGGNNTNG
 C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGGCATGTCT--
--VBSYGTCTGG
 C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATGTCT
GGTTGGCAT----
 A C G T A C G T A C G T C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATGTCT
NTGGAATGTG-
 A C G T C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATGTCT
NTGGAATGTN-
 A C G T C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGGCATGTCT--
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A C G T C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGGCATGTCT--
----CTGTCTGG
 C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCATGTCT--
----TWGTCTGV
 C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGCATGTCT
CCWGGAATGY--
 A C G T A C G T C A G T T C A G C A T G G T A C C G T A C A G T A C T G G A C T A T G C A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T