Information for 13-YACACTGCCATGG (Motif 33)

A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C T G A C C G T A A C G T A C T G A T C G A G T C C T G A A C T G A C G T A C T G A C G T C T G A
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 21.4bp
Average Position of motif in Background47.6 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:YACACTGCCATGG--
AACACTACCATTGTT
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YACACTGCCATGG
CCAACTGCCA---
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YACACTGCCATGG
--GTCCGCCATTA
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

SOX4/MA0867.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YACACTGCCATGG---
AACACTGCAATTGTTC
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YACACTGCCATGG
CGACCAACTGCCATGC
 A C G T A C G T A C G T A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YACACTGCCATGG--
AACACTGAAATTGTT
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YACACTGCCATGG--
AACAATAACATTGTT
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:YACACTGCCATGG-----
----TTGCCATGGCAACN
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YACACTGCCATGG
----TTGCCAAG-
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YACACTGCCATGG
CCAACTGCCA---
 A G C T C G T A T A G C G T C A A G T C A G C T A C T G A T G C A G T C C G T A A C G T A C T G A C T G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T