Information for 18-TGTGTCCATKTCACRT (Motif 29)

A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
Reverse Opposite:
C G T A A G T C T A C G A C G T T A C G C G T A G T A C C G T A A C G T A C T G A C T G C G T A A G T C C T G A A G T C T C G A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 20.9bp
Average Position of motif in Background47.6 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT
BNTGDCCTTG------
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTGTCCATKTCACRT
ATTTTCCATT------
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT--
--TGACCTTTTGACCTTT
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT-
-TTGACCTTTTGACCTT
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT-
--TGACCTTTTGACCTC
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T A C G T
A C G T A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT
----TNCCTTTGATGT
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTGTCCATKTCACRT
-CTGTTCCTGG-----
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTCCATKTCACRT
NTNNCGTATCCAAGTNN---
 A C G T A C G T A C G T A C G T A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTGTCCATKTCACRT
ATTTTCCATT------
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTGTCCATKTCACRT
ATTTTCCATT------
 A C G T T A C G A G C T C T A G A C G T A G T C A G T C G T C A A C G T A C T G C G A T A T G C C G T A A G T C C T A G A C G T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T