Information for 11-GTCACTGGGTATGCAT (Motif 15)

A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G G A T C C G T A A C G T C T G A A T G C A G T C G T A C C G T A A C T G A C G T A C T G G T C A A G T C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.6 +/- 17.6bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCACTGGGTATGCAT
GTAGGTCACTGGGTCA----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTCACTGGGTATGCAT
------GHATATKCAT
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCACTGGGTATGCAT
-WDNCTGGGCA-----
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTCACTGGGTATGCAT------
-----AAAATATGCATAATAAA
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTCACTGGGTATGCAT---
----ATGAATATTCATGAG
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTCACTGGGTATGCAT
CTCATTAATTATGCAT
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTCACTGGGTATGCAT
------GAATATTCAT
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTCACTGGGTATGCAT
NGTCCCNNGGGA-----
 A C G T A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTCACTGGGTATGCAT
-TGATTGGCTANN---
 A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTCACTGGGTATGCAT
AGTCACGC---------
 A C G T A C T G A C G T A G T C G T C A A G T C A C G T A C T G A C T G A T C G A G C T C G T A C G A T C A T G A G T C C G T A A G C T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T