Information for 3-CCATCWMCTGYST (Motif 11)

A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
Reverse Opposite:
C G T A A T C G C T G A A G T C C T G A A C T G A C T G C G A T A C T G C G T A A C G T A C T G C T A G
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.2 +/- 22.2bp
Average Position of motif in Background77.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCATCWMCTGYST
--ACCACCTGTT-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATCWMCTGYST
GGCCATTAAC-----
 A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCATCWMCTGYST
--NNCACCTGNN-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCATCWMCTGYST
--AACACCTGCT-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCATCWMCTGYST
-CCTCACCTG---
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCATCWMCTGYST
-NNGCAGCTGTC-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCATCWMCTGYST
--ATTTCCTGTN-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCATCWMCTGYST
GCCATCTGTT----
 A C G T A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCATCWMCTGYST
-NNGCAGCTGTT-
 A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCATCWMCTGYST
ACCACATCCTGT--
 A C G T A G T C A G T C C G T A A C G T A G T C C G T A G T A C A G T C A G C T A C T G A G C T A T G C A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T