Information for 1-ACACAGTCTGDCT (Motif 2)

T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
Reverse Opposite:
C G T A A T C G G C T A A G T C G T C A A C T G C G T A A G T C A C G T A C T G A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.763e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.2 +/- 27.1bp
Average Position of motif in Background56.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACACAGTCTGDCT
---CTGTCTGG--
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACACAGTCTGDCT---
---CTGTCTGTCACCT
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ACACAGTCTGDCT---
----TGTCTGDCACCT
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACAGTCTGDCT
-CACAGN------
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACACAGTCTGDCT
---TWGTCTGV--
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGDCT
GAGCACAGCAGGACA
 A C G T A C G T T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACACAGTCTGDCT-
----GGTCTGGCAT
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACACAGTCTGDCT
-VBSYGTCTGG--
 T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGDCT
AGCAACAGCCGCACC
 A C G T A C G T T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGTCTGDCT---
NNTNNTGTCTGGNNTNG
 A C G T T G C A G T A C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C T G C A G T A T G C C G A T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G