Information for 5-GCVATGACACCAC (Motif 7)

A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C T A G A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 29.3bp
Average Position of motif in Background37.6 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCVATGACACCAC---
ATAAATGACACCTATCA
 A C G T A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCVATGACACCAC
-NRRTGACGTCAT
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C
A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCVATGACACCAC
-NGRTGACGTCAY
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C
A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCVATGACACCAC---
---ATGACATCATCNN
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCVATGACACCAC----
--NATGACATCATCNNN
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCVATGACACCAC-
--GATGACGTCATC
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T
A C G T A C G T T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCVATGACACCAC
-CNGTCACGCCAC
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCVATGACACCAC
-NGATGACGTCAT
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C
A C G T A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCVATGACACCAC---
NNCNTGACCCCGCTCT
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

Creb5/MA0840.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCVATGACACCAC-
--AATGACGTCACC
 A C T G G T A C T C A G G T C A C G A T A C T G C G T A A G T C G T C A G A T C A G T C C G T A A G T C A C G T
A C G T A C G T T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C