Information for 10-TGACCAGCAGTGA (Motif 15)

A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A G C T C T A G A G T C A C G T A C T G A C T G C G A T A G T C C G T A
p-value:1e-4
log p-value:-9.498e+00
Information Content per bp:1.938
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 27.9bp
Average Position of motif in Background45.8 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGACCAGCAGTGA------
TGACCTAAAGTAACCTCTG
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACCAGCAGTGA---
TGACCTNTAGTAACCC
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A A C G T A C G T A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACCAGCAGTGA
NTGCCCANNGGTNA
 A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGACCAGCAGTGA
---CCAGCTGTTN
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACCAGCAGTGA----
TGACCTTTCGTGACCTT
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGACCAGCAGTGA
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGACCAGCAGTGA
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGACCAGCAGTGA
TGACCT-------
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGACCAGCAGTGA
-BAACAGCTGT--
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGACCAGCAGTGA
-NAHCAGCTGD--
 A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C C T G A C T A G A C G T A C T G C G T A
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T