Information for 5-ACAGSSAGGTCAGGGC (Motif 13)

G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C
Reverse Opposite:
C A T G A T G C A G T C A G T C C G A T A C T G T C G A G T A C T A G C A C G T A T C G T A G C T G A C G C A T A C T G C G A T
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.623
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif104.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets46.0 +/- 26.8bp
Average Position of motif in Background52.1 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC--
------AGGTCAAGGTCA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC--
------AGGTCAAGGTCA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACAGSSAGGTCAGGGC---
-----CAGGCCNNGGCCNN
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC
-GGGGCTYGKCTGGGA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C
A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC-
-------WDNCTGGGCA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC
AGAGCGGGGTCAAGTA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC-
--GGTCANYTGAGGWCA
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T
A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACAGSSAGGTCAGGGC
-----CAGGTGAGG--
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:ACAGSSAGGTCAGGGC--
---------TNNGGGCAG
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACAGSSAGGTCAGGGC
------AGGTCA----
 G C T A T G A C C G T A A C T G A T C G A T G C G T C A A C T G C A T G A G C T A G T C C G T A T C A G A C T G T A C G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T