Information for 6-CAATTTCCAA (Motif 12)

G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A
Reverse Opposite:
A G C T C A G T A C T G C T A G C T G A C G T A C G T A A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif104.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets48.1 +/- 26.2bp
Average Position of motif in Background53.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAATTTCCAA-
-ATTTTCCATT
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATTTCCAA-
-ATTTTCCATT
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAATTTCCAA
--TTTTCCA-
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAATTTCCAA-
-ATTTTCCATT
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAATTTCCAA-
-ATTTTCCATT
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAATTTCCAA
GGGAATTTCC--
 A C G T A C G T G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAATTTCCAA----
TAGTATTTCCGATCTT
 A C G T A C G T G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTCCAA
NNCNNAACAATTNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAATTTCCAA--
--ATTTCCTGTN
 G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAATTTCCAA
ACTACAATTCCC--
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A G C A T C G A T A G C T A G T C G T A C G T C A C T G A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T