Information for 7-GTCTGTCGGC (Motif 26)

A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
p-value:1e-6
log p-value:-1.537e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 21.5bp
Average Position of motif in Background39.4 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGTCGGC-
TGTCTGDCACCT
 A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTCGGC-
CTGTCTGTCACCT
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTCGGC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTCGGC
CTGTCTGG----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTCGGC
TWGTCTGV----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCTGTCGGC
VGCTGWCAVB
 A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGTCGGC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCTGTCGGC
--YTGWCADY
 A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTGTCGGC
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTGTCGGC---
-SCTGTCARCACC
 A C T G A C G T A G T C A C G T A C T G C G A T A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C