Information for 5-TDTCATATAAGTATTB (Motif 9)

A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
Reverse Opposite:
T A C G C G T A C G T A G C A T C T G A G T A C C G A T G A C T C G T A C A G T C T G A C A G T A C T G C G T A G A C T C G T A
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.711
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 23.4bp
Average Position of motif in Background25.8 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:TDTCATATAAGTATTB
--------AATTATT-
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TDTCATATAAGTATTB-
---NNTNNCAATATTAG
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TDTCATATAAGTATTB-
---NNTNNCAATATTAG
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TDTCATATAAGTATTB-
---NNTATANATATACN
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TDTCATATAAGTATTB
------ATGAATATTC
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TDTCATATAAGTATTB--
--NNTAATTATAATTNNN
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TDTCATATAAGTATTB
--TAATTTAATTA---
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TDTCATATAAGTATTB
--TAATTTAATTA---
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TDTCATATAAGTATTB
--TAATTTAATTA---
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TDTCATATAAGTATTB---
----CTATAATTGTTAGCG
 A C G T C T G A C G A T G T A C G C T A A G C T G T C A G A C T C G T A C G T A C A T G A G C T C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G