Information for 4-AAWAAMCTTCCCC (Motif 8)

C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G C T A G C T A G C T G A G T C A C T A G A C T G A C G T A C G T G C T A C G A T A G C T
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.757
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.1 +/- 24.7bp
Average Position of motif in Background45.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAWAAMCTTCCCC
--CAAGCTT----
 C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAWAAMCTTCCCC----
---NNACTTCCTCTTNN
 C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AAWAAMCTTCCCC-
--------TCCCCA
 C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAWAAMCTTCCCC
AAACAAACATTC--
 A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AAWAAMCTTCCCC
GTTCAAAAAAAAAATTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAWAAMCTTCCCC
AAGATATCCTT----
 A C G T A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAWAAMCTTCCCC
AAAGGTAATAAAATTT---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------AAWAAMCTTCCCC
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAWAAMCTTCCCC-
NNNNCAACCTTCGNGA
 A C G T A C G T C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAWAAMCTTCCCC-
--TGACCTTTNCNT
 C T G A C G T A C G A T C G T A C G T A T G A C G A T C A C G T A G C T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T