Information for 1-TCACAGTMAMATG (Motif 3)

C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G
Reverse Opposite:
T A G C C G T A A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C T G C G T A
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.894
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.4 +/- 26.8bp
Average Position of motif in Background16.1 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCACAGTMAMATG--
----GGTCACATGAC
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCACAGTMAMATG--
-----GTCACATGAY
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCACAGTMAMATG--
----GGTCACGTGGC
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCACAGTMAMATG
-CACAGN------
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCACAGTMAMATG--
-----GTCACGTGGT
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCACAGTMAMATG----
-----GWAAYHTGABMC
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCACAGTMAMATG
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCACAGTMAMATG-----
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCACAGTMAMATG--
-----GTCACGTGGM
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TCACAGTMAMATG--
-----GTCACGTGAT
 C G A T A G T C C G T A A G T C C G T A A C T G C G A T G T C A C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T