Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-93 | -2.145e+02 | 0.0000 | 100.0 | 11.24% | 263.5 | 0.55% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-71 | -1.638e+02 | 0.0000 | 115.0 | 12.92% | 657.9 | 1.38% | motif file (matrix) |
svg |
3 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.717e+01 | 0.0000 | 137.0 | 15.39% | 3918.8 | 8.24% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-10 | -2.517e+01 | 0.0000 | 59.0 | 6.63% | 1156.0 | 2.43% | motif file (matrix) |
svg |
5 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.375e+01 | 0.0000 | 77.0 | 8.65% | 1810.9 | 3.81% | motif file (matrix) |
svg |
6 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-10 | -2.369e+01 | 0.0000 | 75.0 | 8.43% | 1743.0 | 3.66% | motif file (matrix) |
svg |
7 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.356e+01 | 0.0000 | 68.0 | 7.64% | 1505.9 | 3.17% | motif file (matrix) |
svg |
8 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 62.0 | 6.97% | 1367.1 | 2.87% | motif file (matrix) |
svg |
9 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-9 | -2.083e+01 | 0.0000 | 38.0 | 4.27% | 635.4 | 1.34% | motif file (matrix) |
svg |
10 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-8 | -1.938e+01 | 0.0000 | 88.0 | 9.89% | 2417.3 | 5.08% | motif file (matrix) |
svg |
11 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-7 | -1.738e+01 | 0.0000 | 113.0 | 12.70% | 3541.8 | 7.44% | motif file (matrix) |
svg |
12 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.699e+01 | 0.0000 | 52.0 | 5.84% | 1200.6 | 2.52% | motif file (matrix) |
svg |
13 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.635e+01 | 0.0000 | 66.0 | 7.42% | 1734.4 | 3.65% | motif file (matrix) |
svg |
14 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.633e+01 | 0.0000 | 37.0 | 4.16% | 724.2 | 1.52% | motif file (matrix) |
svg |
15 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-6 | -1.588e+01 | 0.0000 | 23.0 | 2.58% | 328.0 | 0.69% | motif file (matrix) |
svg |
16 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-6 | -1.575e+01 | 0.0000 | 54.0 | 6.07% | 1321.1 | 2.78% | motif file (matrix) |
svg |
17 |
| Sp1(Zf)/Promoter/Homer | 1e-6 | -1.568e+01 | 0.0000 | 58.0 | 6.52% | 1469.8 | 3.09% | motif file (matrix) |
svg |
18 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.568e+01 | 0.0000 | 40.0 | 4.49% | 841.4 | 1.77% | motif file (matrix) |
svg |
19 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-6 | -1.535e+01 | 0.0000 | 36.0 | 4.04% | 722.7 | 1.52% | motif file (matrix) |
svg |
20 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.519e+01 | 0.0000 | 122.0 | 13.71% | 4084.4 | 8.58% | motif file (matrix) |
svg |
21 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.476e+01 | 0.0000 | 26.0 | 2.92% | 435.0 | 0.91% | motif file (matrix) |
svg |
22 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.471e+01 | 0.0000 | 32.0 | 3.60% | 615.9 | 1.29% | motif file (matrix) |
svg |
23 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.423e+01 | 0.0000 | 39.0 | 4.38% | 858.2 | 1.80% | motif file (matrix) |
svg |
24 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.401e+01 | 0.0000 | 58.0 | 6.52% | 1549.0 | 3.26% | motif file (matrix) |
svg |
25 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.400e+01 | 0.0000 | 74.0 | 8.31% | 2170.8 | 4.56% | motif file (matrix) |
svg |
26 |
| E-box(bHLH)/Promoter/Homer | 1e-5 | -1.380e+01 | 0.0000 | 18.0 | 2.02% | 238.6 | 0.50% | motif file (matrix) |
svg |
27 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 39.0 | 4.38% | 878.5 | 1.85% | motif file (matrix) |
svg |
28 |
| ETS(ETS)/Promoter/Homer | 1e-5 | -1.332e+01 | 0.0000 | 40.0 | 4.49% | 926.4 | 1.95% | motif file (matrix) |
svg |
29 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.321e+01 | 0.0000 | 41.0 | 4.61% | 965.3 | 2.03% | motif file (matrix) |
svg |
30 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 100.0 | 11.24% | 3301.0 | 6.94% | motif file (matrix) |
svg |
31 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.252e+01 | 0.0000 | 58.0 | 6.52% | 1627.4 | 3.42% | motif file (matrix) |
svg |
32 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.178e+01 | 0.0001 | 13.0 | 1.46% | 150.4 | 0.32% | motif file (matrix) |
svg |
33 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 42.0 | 4.72% | 1062.5 | 2.23% | motif file (matrix) |
svg |
34 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.094e+01 | 0.0002 | 32.0 | 3.60% | 741.5 | 1.56% | motif file (matrix) |
svg |
35 |
| KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.085e+01 | 0.0002 | 53.0 | 5.96% | 1528.0 | 3.21% | motif file (matrix) |
svg |
36 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -1.041e+01 | 0.0003 | 50.0 | 5.62% | 1435.4 | 3.02% | motif file (matrix) |
svg |
37 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.020e+01 | 0.0004 | 58.0 | 6.52% | 1766.2 | 3.71% | motif file (matrix) |
svg |
38 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-4 | -9.890e+00 | 0.0005 | 129.0 | 14.49% | 4892.6 | 10.28% | motif file (matrix) |
svg |
39 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-4 | -9.701e+00 | 0.0006 | 10.0 | 1.12% | 111.8 | 0.23% | motif file (matrix) |
svg |
40 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-4 | -9.615e+00 | 0.0006 | 103.0 | 11.57% | 3743.5 | 7.87% | motif file (matrix) |
svg |
41 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.510e+00 | 0.0007 | 74.0 | 8.31% | 2483.4 | 5.22% | motif file (matrix) |
svg |
42 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.370e+00 | 0.0007 | 86.0 | 9.66% | 3014.3 | 6.34% | motif file (matrix) |
svg |
43 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-4 | -9.270e+00 | 0.0008 | 108.0 | 12.13% | 4003.0 | 8.41% | motif file (matrix) |
svg |
44 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.268e+00 | 0.0008 | 44.0 | 4.94% | 1266.4 | 2.66% | motif file (matrix) |
svg |
45 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -9.185e+00 | 0.0008 | 55.0 | 6.18% | 1712.2 | 3.60% | motif file (matrix) |
svg |
46 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.954e+00 | 0.0010 | 18.0 | 2.02% | 345.4 | 0.73% | motif file (matrix) |
svg |
47 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.834e+00 | 0.0011 | 22.0 | 2.47% | 478.6 | 1.01% | motif file (matrix) |
svg |
48 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.756e+00 | 0.0012 | 63.0 | 7.08% | 2076.9 | 4.37% | motif file (matrix) |
svg |
49 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-3 | -8.433e+00 | 0.0016 | 12.0 | 1.35% | 182.8 | 0.38% | motif file (matrix) |
svg |
50 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.355e+00 | 0.0017 | 16.0 | 1.80% | 300.4 | 0.63% | motif file (matrix) |
svg |
51 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.806e+00 | 0.0029 | 4.0 | 0.45% | 18.6 | 0.04% | motif file (matrix) |
svg |
52 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.782e+00 | 0.0029 | 23.0 | 2.58% | 552.2 | 1.16% | motif file (matrix) |
svg |
53 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.747e+00 | 0.0030 | 165.0 | 18.54% | 6866.6 | 14.43% | motif file (matrix) |
svg |
54 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -7.701e+00 | 0.0031 | 24.0 | 2.70% | 591.9 | 1.24% | motif file (matrix) |
svg |
55 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.164e+00 | 0.0051 | 36.0 | 4.04% | 1076.6 | 2.26% | motif file (matrix) |
svg |
56 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -7.091e+00 | 0.0054 | 45.0 | 5.06% | 1448.7 | 3.04% | motif file (matrix) |
svg |
57 |
| GFY(?)/Promoter/Homer | 1e-3 | -7.007e+00 | 0.0058 | 11.0 | 1.24% | 185.7 | 0.39% | motif file (matrix) |
svg |
58 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -6.984e+00 | 0.0058 | 12.0 | 1.35% | 215.4 | 0.45% | motif file (matrix) |
svg |
59 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.713e+00 | 0.0075 | 86.0 | 9.66% | 3285.8 | 6.91% | motif file (matrix) |
svg |
60 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -6.674e+00 | 0.0077 | 11.0 | 1.24% | 193.4 | 0.41% | motif file (matrix) |
svg |
61 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -6.431e+00 | 0.0096 | 33.0 | 3.71% | 1002.4 | 2.11% | motif file (matrix) |
svg |
62 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.418e+00 | 0.0096 | 39.0 | 4.38% | 1248.4 | 2.62% | motif file (matrix) |
svg |
63 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.335e+00 | 0.0102 | 59.0 | 6.63% | 2112.7 | 4.44% | motif file (matrix) |
svg |
64 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.033e+00 | 0.0136 | 28.0 | 3.15% | 827.5 | 1.74% | motif file (matrix) |
svg |
65 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.033e+00 | 0.0136 | 17.0 | 1.91% | 411.4 | 0.86% | motif file (matrix) |
svg |
66 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.985e+00 | 0.0139 | 5.0 | 0.56% | 49.2 | 0.10% | motif file (matrix) |
svg |
67 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-2 | -5.653e+00 | 0.0190 | 25.0 | 2.81% | 731.7 | 1.54% | motif file (matrix) |
svg |
68 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.629e+00 | 0.0192 | 87.0 | 9.78% | 3465.2 | 7.28% | motif file (matrix) |
svg |
69 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.582e+00 | 0.0199 | 19.0 | 2.13% | 504.3 | 1.06% | motif file (matrix) |
svg |
70 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -5.563e+00 | 0.0200 | 40.0 | 4.49% | 1356.8 | 2.85% | motif file (matrix) |
svg |
71 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -5.396e+00 | 0.0232 | 79.0 | 8.88% | 3123.5 | 6.56% | motif file (matrix) |
svg |
72 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.308e+00 | 0.0250 | 103.0 | 11.57% | 4265.9 | 8.97% | motif file (matrix) |
svg |
73 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.264e+00 | 0.0258 | 36.0 | 4.04% | 1210.2 | 2.54% | motif file (matrix) |
svg |
74 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.209e+00 | 0.0269 | 53.0 | 5.96% | 1958.6 | 4.12% | motif file (matrix) |
svg |
75 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.173e+00 | 0.0275 | 46.0 | 5.17% | 1651.6 | 3.47% | motif file (matrix) |
svg |
76 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.171e+00 | 0.0275 | 30.0 | 3.37% | 965.5 | 2.03% | motif file (matrix) |
svg |
77 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.165e+00 | 0.0275 | 29.0 | 3.26% | 924.7 | 1.94% | motif file (matrix) |
svg |
78 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.117e+00 | 0.0280 | 7.0 | 0.79% | 113.5 | 0.24% | motif file (matrix) |
svg |
79 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-2 | -5.016e+00 | 0.0305 | 136.0 | 15.28% | 5908.0 | 12.42% | motif file (matrix) |
svg |
80 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.969e+00 | 0.0316 | 148.0 | 16.63% | 6506.0 | 13.67% | motif file (matrix) |
svg |
81 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-2 | -4.927e+00 | 0.0326 | 92.0 | 10.34% | 3799.8 | 7.99% | motif file (matrix) |
svg |
82 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.906e+00 | 0.0329 | 38.0 | 4.27% | 1326.6 | 2.79% | motif file (matrix) |
svg |
83 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.803e+00 | 0.0360 | 68.0 | 7.64% | 2689.6 | 5.65% | motif file (matrix) |
svg |
84 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.754e+00 | 0.0374 | 42.0 | 4.72% | 1515.4 | 3.19% | motif file (matrix) |
svg |
85 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.734e+00 | 0.0376 | 31.0 | 3.48% | 1040.6 | 2.19% | motif file (matrix) |
svg |
86 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -4.714e+00 | 0.0380 | 15.0 | 1.69% | 396.2 | 0.83% | motif file (matrix) |
svg |
87 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.629e+00 | 0.0409 | 44.0 | 4.94% | 1616.6 | 3.40% | motif file (matrix) |
svg |
88 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -4.622e+00 | 0.0409 | 46.0 | 5.17% | 1706.7 | 3.59% | motif file (matrix) |
svg |