Information for 5-GCTAATGCAA (Motif 9)

A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A
Reverse Opposite:
A C G T C A G T A T C G T G A C G T C A G C A T A G C T C G T A C A T G T A G C
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.653
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.07%
Number of Background Sequences with motif970.9
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets53.3 +/- 26.1bp
Average Position of motif in Background49.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCTAATGCAA-
-MTGATGCAAT
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCTAATGCAA-
-ATGATGCAAT
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

ATF4/MA0833.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTAATGCAA--
GGATGATGCAATA
 A C G T A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTAATGCAA
NATGTTGCAA
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTAATGCAA--
--TTATGCAAAT
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T A C G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTAATGCAA-
--TTATGCAAT
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T
A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTAATGCAA-----
--ATATGCAAATNNN
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTAATGCAA-
-RTTATGYAAB
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTAATGCAA-
NATTGTGCAAT
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTAATGCAA----
--AGATGCAATCCC
 A T C G G T A C G C A T T C G A C G T A C A G T A C T G T A G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C