Information for 3-GCGCCACGTG (Motif 7)

A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G
Reverse Opposite:
G T A C C G T A A T G C C T A G A C G T C T A G C T A G T G A C C T A G T A G C
p-value:1e-11
log p-value:-2.712e+01
Information Content per bp:1.548
Number of Target Sequences with motif144.0
Percentage of Target Sequences with motif16.18%
Number of Background Sequences with motif4203.0
Percentage of Background Sequences with motif8.83%
Average Position of motif in Targets49.9 +/- 24.9bp
Average Position of motif in Background49.7 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mycn/MA0104.3/Jaspar

Match Rank:1
Score:0.88
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG
--GCCACGTG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG-
--GCCACGTGT
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.85
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG
--NCCACGTG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.85
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG--
--KCCACGTGAC
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GCGCCACGTG-
-NNCCACGTGG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GCGCCACGTG-
-GGTCACGTGA
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG
--GNCACGTG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG
--GHCACGTG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GCGCCACGTG-
-NNCCACGTGG
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCGCCACGTG----
--ACCACGTGGTNN
 A T C G G A T C A C T G G A T C G A T C T G C A G A T C T A C G G C A T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T