Information for 3-GGVAGGRGGAGGAGSC (Motif 4)

C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
Reverse Opposite:
A C T G A T C G A G T C G A C T A G T C A G T C A G C T A T G C A T G C A G C T G T A C A G T C A G C T A G C T A T G C G A T C
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.687
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif293.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets51.7 +/- 22.5bp
Average Position of motif in Background50.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GGVAGGRGGAGGAGSC
---RGKGGGCGGAGC-
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GGVAGGRGGAGGAGSC
----GGGGGCGGGGC-
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GGVAGGRGGAGGAGSC
-GGCGGGGGCGGGGG-
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGVAGGRGGAGGAGSC
GGGNGGGGGCGGGGC-
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGVAGGRGGAGGAGSC
-GGGGGGGGGGGGGGA
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGVAGGRGGAGGAGSC-
---AGGGGGCGGGGCTG
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGVAGGRGGAGGAGSC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGVAGGRGGAGGAGSC
----GGGGGCGGGGCC
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGVAGGRGGAGGAGSC
---RGKGGGCGKGGC-
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C
A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGVAGGRGGAGGAGSC------
-GGAGGAGGAGGGGGAGGAGGA
 C T A G A T C G T C G A T C G A T C A G A C T G C T G A A T C G A T C G T C G A A C T G T C A G C T G A A C T G T A G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A