Information for 10-AAAGTTAACA (Motif 15)

C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
Reverse Opposite:
C G A T A T C G A C G T A G C T C T G A C G T A A G T C C G A T A C G T A C G T
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.856
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif58.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets53.1 +/- 22.7bp
Average Position of motif in Background52.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAAGTTAACA
AAAGTAAACA
 C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAAGTTAACA
AAAGTAAACA
 C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTAACA----
CAAAGTAAACANNNN
 A C G T C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTTAACA
NCTAAGTAAACA
 A C G T A C G T C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AAAGTTAACA--
TATGTAAACANG
 C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAACA
AAAAGTCAA--
 A C G T C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAAGTTAACA--
TAAGTAAACAAA
 C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTTAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAGTTAACA-----
TGATTGTTAACAGTTGG
 A C G T A C G T C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AAAGTTAACA
WAAGTAAAYA
 C G T A C G T A C G T A A C T G C G A T G A C T C T G A G T C A T A G C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A