Information for 9-TMTGTCCCTGGAGGKC (Motif 25)

C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
Reverse Opposite:
A C T G T G C A A G T C A T G C A G C T A T G C A G T C C T G A A C T G C A T G A C T G C G T A A T G C G C T A C A G T C G T A
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.722
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 18.0bp
Average Position of motif in Background57.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TMTGTCCCTGGAGGKC
--NGTCCCNNGGGA--
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TMTGTCCCTGGAGGKC
-CTGTTCCTGG-----
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TMTGTCCCTGGAGGKC-
---TTTCCTAGAAAGCA
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C A C G T
A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TMTGTCCCTGGAGGKC--
---TTTCCTGGAAAGNNN
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TMTGTCCCTGGAGGKC
--ANTCCCTNGGGAAT
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TMTGTCCCTGGAGGKC
---GTCACATGAY---
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TMTGTCCCTGGAGGKC-
-GGGTTACTANAGGTCA
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TMTGTCCCTGGAGGKC
--GTCCCCAGGGGA--
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TMTGTCCCTGGAGGKC
----TTCCNGGAAG--
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TMTGTCCCTGGAGGKC
--AGTCACGC------
 C G A T G T C A C G A T A T C G A C G T A G T C G A T C A G T C G A C T C T A G A T C G C T G A T A C G T A C G A C G T G T A C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T