Information for 11-CAGGCGCTAA (Motif 21)

A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
Reverse Opposite:
G A C T A C G T C G T A A T C G A G T C A C T G A G T C A G T C A C G T A T C G
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.811
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif65.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets56.5 +/- 27.4bp
Average Position of motif in Background46.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCGCTAA
CCAGACRSVB-
 A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGGCGCTAA--
RGGGCACTAACY
 A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAGGCGCTAA
TGCGCAGGCGC---
 A C G T A C G T A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCGCTAA
CCAGACAG---
 A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCTAA--
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGCTAA
NNCAGGTGTN--
 A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGGCGCTAA----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGCTAA
NNCAGGTGCG--
 A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCTAA
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGGCGCTAA--
--GGCGGGAAAH
 A T G C C G T A T C A G C T A G A G T C A C T G A T G C A C G T T G C A C T G A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T