Information for 11-GTCAAGAGYCKCC (Motif 14)

C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C A C T G C T A G A G T C A G C T G T A C A C G T C G A T A T C G G T C A A G T C
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.757
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.3 +/- 22.4bp
Average Position of motif in Background42.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCAAGAGYCKCC
BTBRAGTGSN---
 C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGAGYCKCC
NGNTCTAGAACCNGV
 A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAGAGYCKCC
CAAAGGTCAAGGG-----
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCAAGAGYCKCC
NTCAAGTGG----
 C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCAAGAGYCKCC
CTYRAGTGSY---
 C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCAAGAGYCKCC
CCTGTCAA--------
 A C G T A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAAGAGYCKCC
NCWRWGTAAACANSV---
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGAGYCKCC
AGGTCAAGGTCA---
 A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GTCAAGAGYCKCC-
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAGAGYCKCC
NTGTCAN--------
 A C G T A C G T C T A G A C G T A T G C C G T A C G T A C A T G C T G A C T A G A G T C G T A C A C T G A T G C A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T