Information for 8-GCAAATTACA (Motif 13)

C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
Reverse Opposite:
C A G T C A T G C A G T G C T A T C G A C G A T A G C T C A G T C T A G G A T C
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.658
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif761.7
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets53.4 +/- 27.2bp
Average Position of motif in Background50.7 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nobox/MA0125.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAAATTACA
ACCAATTA--
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCAAATTACA
GCTAATTAGC
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

DLX6/MA0882.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CCAATTAC-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C A C G T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CCAATTAA-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CCAATTAA-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A A C G T

VSX1/MA0725.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CTAATTAT-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CTAATTAG-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCAAATTACA
GCCAATTAAC
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCAAATTACA
TCTAATTAAA
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAAATTACA
-CCAATTAC-
 C T A G G A T C G T C A T C G A G C T A A G C T C G A T G T C A G T A C G T C A
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T