Information for 6-TGTTGTCATG (Motif 10)

C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G
Reverse Opposite:
G T A C G C T A C G A T T A C G T C G A A G T C C T G A C G T A G T A C G C T A
p-value:1e-12
log p-value:-2.966e+01
Information Content per bp:1.653
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif8.41%
Number of Background Sequences with motif1496.8
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets51.5 +/- 24.6bp
Average Position of motif in Background52.4 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTCATG-
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

JUN/MA0488.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGTTGTCATG
AAGATGATGTCAT-
 A C G T A C G T A C G T A C G T C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TGTTGTCATG
--NTGTCAN-
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTCATG--
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TGTTGTCATG
----GTCATN
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGTTGTCATG-----
-GTTGCCATGGNAAC
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGTTGTCATG----
GGTTGCCATGGCAA
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTCATG---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTTGTCATG----
NGTTGCCATGGCAA
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G A C G T A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGTTGTCATG
--YTGWCADY
 C G A T C A T G G C A T G A C T C T A G A G C T A T G C G C T A C G A T C A T G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C