Information for 1-CATGCGACCC (Motif 6)

A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A G T C C T A G A G T C C T G A A C G T A C T G
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 20.7bp
Average Position of motif in Background53.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CATGCGACCC
GTCATGTGACC-
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATGCGACCC
GCCACGTGACC-
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CATGCGACCC
GTGCCACGCGACTG
 A C G T A C G T A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CATGCGACCC
RTCATGTGAC--
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CATGCGACCC-
TCACGTGACCGG
 A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATGCGACCC
ACCACGTGAC--
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATGCGACCC---
---AAGACCCYYN
 A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATGCGACCC
GGCACGCGTC--
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATGCGACCC
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATGCGACCC
NCACGTGACN-
 A C G T A G T C C G T A A G C T A C T G A G T C A C T G G T C A A G T C G T A C A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T