Information for 2-TGCTCTSAGWACCACA (Motif 2)

C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
Reverse Opposite:
A C G T A T C G C G A T A C T G A C T G A G C T C G T A T A G C A C G T T A G C C G T A C T A G C T G A A C T G A G T C C G T A
p-value:1e-14
log p-value:-3.229e+01
Information Content per bp:1.732
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.9 +/- 25.4bp
Average Position of motif in Background44.7 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGCTCTSAGWACCACA
-SCTGTCARCACC---
 C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGCTCTSAGWACCACA---
-------NWAACCACADNN
 C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RFX4/MA0799.1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCTCTSAGWACCACA
CGTTGCCATGGCAACG---
 A C G T A C G T A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCTCTSAGWACCACA
CTGCCCGCA--------
 A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGCTCTSAGWACCACA-
--ATGTCACAACAACAC
 C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTSAGWACCACA
TTGCCATGGCAACC---
 A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGCTCTSAGWACCACA
AACTAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTSAGWACCACA
TTGCCATGGCAACN---
 A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGCTCTSAGWACCACA
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TGCTCTSAGWACCACA
CGTTGCCATGGCAACG---
 A C G T A C G T A C G T C G A T A C T G A G T C A G C T G A T C A C G T A T C G C G T A A C T G G C A T C T G A A G T C G T A C C G T A A T G C G T C A
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T A C G T A C G T