Information for 3-CKGCGGCTCT (Motif 8)

A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A T G C A G T C A C T G A G T C G T C A A C T G
p-value:1e-7
log p-value:-1.722e+01
Information Content per bp:1.868
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif390.4
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets60.5 +/- 22.8bp
Average Position of motif in Background48.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CKGCGGCTCT
GCTCGGSCTC-
 A C G T A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CKGCGGCTCT
----NGCTN-
 A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CKGCGGCTCT
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CKGCGGCTCT
TGCCTGAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CKGCGGCTCT---
---AASCACTCAA
 A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CKGCGGCTCT------
----GGCTCYAKCAYC
 A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CKGCGGCTCT----
----RSCACTYRAG
 A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CKGCGGCTCT----
----NSCACTYVAV
 A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CKGCGGCTCT
NGCCTGAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CKGCGGCTCT
NGCCTNAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C T G T G A C C T A G A T C G A G T C A C G T A G T C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T