Information for 2-CAGGGCYTKKGSACAY (Motif 2)

A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G A C G T A T C G A G T C G T C A G T C A C G T A C T A G A C T G A G T C G T A C A G T C A G C T C T A G
p-value:1e-11
log p-value:-2.757e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 21.0bp
Average Position of motif in Background44.2 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGGGCYTKKGSACAY----
---TACATGTGCACATAAAA
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGCYTKKGSACAY
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGGGCYTKKGSACAY---
--NNGTATGTGCACATNNN
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAGGGCYTKKGSACAY-----
-----NNTTTGCACACGGCCC
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGGCYTKKGSACAY-
--TGGACTTTGNNCTCN
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CAGGGCYTKKGSACAY-----
-------TTTGCACACGGCAC
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAGGGCYTKKGSACAY
CNAGGCCT--------
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGGGCYTKKGSACAY
CTAGGCCT--------
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CAGGGCYTKKGSACAY
------CCAGGAACAG
 A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCYTKKGSACAY
GTAGGTCACTGGGTCA-
 A C G T A G T C C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C T G T A G C C G T A A G T C C G T A A G T C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T