Information for 6-RGGCCTATGTACA (Motif 8)

C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
Reverse Opposite:
C A G T A C T G A C G T C T G A A T G C G T C A A G C T C G T A A C T G A C T G G T A C G T A C G A C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.640
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif109.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets55.0 +/- 20.0bp
Average Position of motif in Background46.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RGGCCTATGTACA-
--SCHTGTTTACAT
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A A C G T
A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RGGCCTATGTACA--
----ATATTTACATA
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RGGCCTATGTACA
--CCATATGT---
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGGCCTATGTACA--
---CNTGTTTACATA
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RGGCCTATGTACA
--TCCTGTTTACA
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RGGCCTATGTACA
-ACCATATGTT--
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RGGCCTATGTACA----
--BSNTGTTTACWYWGN
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RGGCCTATGTACA
-GACATATGTT--
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RGGCCTATGTACA--
TACCCTAGTTACCGA
 C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RGGCCTATGTACA
CNAGGCCT-------
 A C G T A C G T C T G A C A T G A C T G G T A C G T A C G C A T C T G A A C G T A T C G G A C T C G T A T A G C G T C A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T