Information for 3-CACTGYCACCTAG (Motif 4)

A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G C T A G A C G T A C T G C T G A A G T C C G T A A C T G C G A T A C T G
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TGACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CACTGYCACCTAG
---TGTCANYT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACTGYCACCTAG
-ATTAACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACTGYCACCTAG
-KTTCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTGYCACCTAG------
ANAGTGCCACCTGGTGGCCA
A C G T A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CACTGYCACCTAG
---TCACACCT--
A G T C C G T A G T A C A C G T T A C G A G C T A G T C C G T A A G T C A G T C C G A T C G T A A C T G
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T