Information for 4-GGAARGAATC (Motif 11)

C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A G T C G A C T A C G T A C G T A G T C G A T C
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif149.7
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets54.1 +/- 24.6bp
Average Position of motif in Background51.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGAARGAATC
TACTGGAAAAAAAA
 A C G T A C G T A C G T A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAARGAATC------
AAGGCGAAATCATCGCA
 A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAARGAATC----
----CAAATCACTG
 C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGAARGAATC--
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAARGAATC-
GGCCATAAATCA
 A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAARGAATC--
GGCCATAAATCAC
 A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAARGAATC-
GCCATAAATCA
 C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAARGAATC-
GAAATGACTCA
 C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAARGAATC
NNTGGAAANN---
 A C G T A C G T A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAARGAATC-
GGCCATAAATCA
 A C G T C T A G A C T G G T C A C G T A C T G A C T A G C G T A G T C A A C G T A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A