Information for 2-ATRTGCAAAGGCCCTG (Motif 4)

T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
Reverse Opposite:
A G T C T C G A A C T G A C T G A C T G A G T C A G T C C G A T C A G T C A G T A T C G A G T C C G T A A G C T C T G A A G C T
p-value:1e-12
log p-value:-2.958e+01
Information Content per bp:1.709
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.5 +/- 30.3bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:ATRTGCAAAGGCCCTG-----
-------CAGGCCNNGGCCNN
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.59
Offset:8
Orientation:forward strand
Alignment:ATRTGCAAAGGCCCTG
--------AGGCCTAG
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:forward strand
Alignment:ATRTGCAAAGGCCCTG
--------AGGCCTNG
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATRTGCAAAGGCCCTG-
-------AAGACCCYYN
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATRTGCAAAGGCCCTG
----GGAAATCCCC--
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATRTGCAAAGGCCCTG
----GGAAANCCCC--
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATRTGCAAAGGCCCTG
---GGGAAATCCCCN-
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ATRTGCAAAGGCCCTG
----GGAAATTCCC--
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATRTGCAAAGGCCCTG---
--AAGCATACGCCCAACTT
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G A C G T A C G T A C G T
A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ATRTGCAAAGGCCCTG
----GGAAATTCCC--
 T C G A G A C T C T G A C G A T A C T G T A G C G C T A G T C A C G T A A C T G A C T G G T A C A G T C A G T C A G C T T A C G
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T