Information for 1-TTKTYCYWGGCTBTYA (Motif 3)

G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
Reverse Opposite:
C A G T C T G A C T G A T C A G C G T A A T C G A T G C G T A C C G T A C T G A T C A G C T A G T C G A T G A C C T G A C T G A
p-value:1e-12
log p-value:-2.958e+01
Information Content per bp:1.569
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets42.6 +/- 24.6bp
Average Position of motif in Background80.0 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTKTYCYWGGCTBTYA
CTGTTCCTGG------
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTKTYCYWGGCTBTYA
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TTKTYCYWGGCTBTYA
-----NTTGGCANN--
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTKTYCYWGGCTBTYA
TTTTCCA---------
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TTKTYCYWGGCTBTYA
--------NGCTN---
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTKTYCYWGGCTBTYA
ATTTTCCATT-------
 A C G T G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TTKTYCYWGGCTBTYA
------TTGGCA----
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TTKTYCYWGGCTBTYA
-----CTTGGCAA---
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TTKTYCYWGGCTBTYA
YCTTTGTTCC---------
 A C G T A C G T A C G T G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TTKTYCYWGGCTBTYA
----NNTTGGCANN--
 G A C T A G C T A C T G A G C T A G T C A G T C G A C T G C A T C A T G A T C G A T G C C G A T A G T C G A C T G A C T G T C A
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T