Information for 9-AGCCTCAGAC (Motif 17)

C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C
Reverse Opposite:
C T A G C A G T A T G C C G A T A C T G C G T A C T A G C T A G A G T C C G A T
p-value:1e-7
log p-value:-1.685e+01
Information Content per bp:1.802
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets68.0 +/- 20.0bp
Average Position of motif in Background48.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGCCTCAGAC-
AGCCTCAGGCA
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGCCTCAGAC-
NGCCTNAGGCN
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCTCAGAC-
CGCCTCAGGCA
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTCAGAC---
NTNGCCTCAGGCNNN
A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCAGAC---
ATTGCCTCAGGCAAT
A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCCTCAGAC--
----TCAGTCTT
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCCTCAGAC---
-SCCTSAGGSCAW
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCCTCAGAC---
-GCCTCAGGGCAT
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCCTCAGAC--
----BCAGACWA
C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTCAGAC
AAACCACAGAN
A C G T C G T A A C T G A G T C A G T C A C G T A G T C C G T A A T C G G T C A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C