Information for 3-ATYTTTTWWAAAA (Motif 11)

G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A
Reverse Opposite:
A G C T G A C T A C G T G C A T C G T A C G A T C G T A G C T A C T G A C T G A T C G A C G T A C A G T
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.670
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.1 +/- 16.3bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATYTTTTWWAAAA---
TCTTTATATATAAATA
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATYTTTTWWAAAA
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATYTTTTWWAAAA--
-TCTTTANTAATANN
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATYTTTTWWAAAA--
CCGTATTATAAACAA
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATYTTTTWWAAAA
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATYTTTTWWAAAA---
NNNTTTTAATTAANNNN
 A C G T G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ATYTTTTWWAAAA-------
-----GTATAAAAGGCGGGG
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ATYTTTTWWAAAA-------
-----GTATAAAAGGCGGGG
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATYTTTTWWAAAA--
-TTTTTTTTCNNGTN
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATYTTTTWWAAAA----
-CTACCAATAAAATTCT
 G T C A G C A T A G C T A G C T A G C T C G A T G C A T C G T A C G A T C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T