p-value: | 1e-6 |
log p-value: | -1.594e+01 |
Information Content per bp: | 1.727 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 2.73% |
Number of Background Sequences with motif | 37.7 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 50.0 +/- 20.3bp |
Average Position of motif in Background | 52.2 +/- 30.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.8 |
Multiplicity (# of sites on avg that occur together) | 1.29 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AMCTCAGTAGGGG- --CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AMCTCAGTAGGGG--- -DCHCAGCAGGRGGCC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AMCTCAGTAGGGG- CCACACAGCAGGAGA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AMCTCAGTAGGGG- CCACACAGCAGGAGA |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AMCTCAGTAGGGG -DCTCAGCAGG-- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AMCTCAGTAGGGG- GAGCACAGCAGGACA |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AMCTCAGTAGGGG--- --CACAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AMCTCAGTAGGGG--- -NCGCAGCGGGGGGTC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AMCTCAGTAGGGG--- -NCNCAGCGGGGGGTC |
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PH0152.1_Pou6f1_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AMCTCAGTAGGGG- GCAACCTCATTATNNNN |
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