Information for 3-CTGCAAAGAG (Motif 6)

G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T T G A C A G C T A G C T A C G T A C T G A T G C C G T A C A T G
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.850
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif123.0
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets59.2 +/- 29.7bp
Average Position of motif in Background50.3 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGCAAAGAG
CCAAAAATAG
 G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAAGAG
TTATGCAAAT--
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGCAAAGAG
ATATGCAAAT--
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGAG-
ACTATAAATAGA
 A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGAG
GGTGCCAAGT-
 A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCAAAGAG--
-TGTAAACAGGA
 G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T A C G T
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CTGCAAAGAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAAGAG--
CAATTGCAAAAATAT
 A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGCAAAGAG-
GCTATAAATAGC
 A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAAGAG-
ATATGCAAATNNN
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C T G A C T G A A C T G C G T A A C T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A