Information for 2-AGGCAAYWGGGAGCCA (Motif 3)

C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A
Reverse Opposite:
A C G T C A T G C T A G G A T C A G C T A T G C A G T C A G T C G C A T T C A G A C G T C A G T A C T G A G T C G T A C G A C T
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.661
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.1 +/- 23.2bp
Average Position of motif in Background39.5 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGGCAAYWGGGAGCCA---------
RGGCAMTAGGGAGCCATRGAAGGTK
 C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGCAAYWGGGAGCCA-
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGCAAYWGGGAGCCA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAYWGGGAGCCA--
GTAGGTCACGGTGACCTACT
 A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AGGCAAYWGGGAGCCA
--------CGGAGC--
 C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAYWGGGAGCCA
AAGGCAAGTGT------
 A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAAYWGGGAGCCA
NACAGGAAAT---------
 A C G T A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGGCAAYWGGGAGCCA-----
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T A C G T A C G T A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGGCAAYWGGGAGCCA--
--NNTGTAGGTAGCANNT
 C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T A C G T
A C G T A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAYWGGGAGCCA--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T C T G A A C T G C T A G T G A C G T C A G T C A A G T C C G T A C T A G C T A G A T C G C T G A C T A G A G T C G A T C G T C A A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G