Information for 5-TGTTGTTGTT (Motif 12)

C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T
Reverse Opposite:
T G C A C T G A G T A C C G T A T C G A T G A C G C T A T C G A T G A C G T C A
p-value:1e-4
log p-value:-9.789e+00
Information Content per bp:1.665
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif11.33%
Number of Background Sequences with motif1316.1
Percentage of Background Sequences with motif5.10%
Average Position of motif in Targets46.5 +/- 26.2bp
Average Position of motif in Background49.9 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTTGTT--
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGTTGTT----
GTNTTGTTGTGANNT
 A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGTTGTT----
NTNTTGTTGTTTGTN
 A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTGTT----
NNTTTTGTTTTGATNT
 A C G T A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTTGTT---
NCNTTTGTTATTTNN
 A C G T A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTTGTTGTT-
-NNTGTGGTTT
 C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTTGTT----
CTATAATTGTTAGCG
 A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGTTGTTGTT-
-GCTGTGGTTT
 C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTTGTT---
TAATTGTTCTAAAC
 A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGTTGTT
AACAATGNTATTGTT
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T C G A T A C T G A G C T C G A T C A T G A G C T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T