Information for 3-CTCCCTGGGA (Motif 9)

A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A
Reverse Opposite:
G C A T A T G C T A G C G A T C C T G A C T A G T C A G C T A G T G C A T A C G
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.650
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif20.54%
Number of Background Sequences with motif5950.1
Percentage of Background Sequences with motif12.63%
Average Position of motif in Targets50.5 +/- 27.4bp
Average Position of motif in Background49.8 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGGGA--
TCCCCTGGGGAC
 A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTCCCTGGGA---
---CSTGGGAAAD
 A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTGGGA-
NGTCCCNNGGGA
 A C G T A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCCCTGGGA-
-WDNCTGGGCA
 A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCCCTGGGA
CTTCCNGGAA
 A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGGGA---
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGGGA---
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTGGGA---
ANTCCCTNGGGAAT
 A C G T A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGGGA-----
TTTCCTGGAAAGNNN
 A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTGGGA
CACTTCCTGT--
 A C G T A C G T A T G C A C G T G A T C A G T C G A T C G A C T C A T G A T C G T A C G C G T A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T